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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 375aa MW: 41843.5 Da PI: 7.6397 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.4 | 1.3e-40 | 86 | 162 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC +dl++ ++yhrrhkvCe hsk+p+v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_023515634.1 86 CLVDGCVSDLNNYRDYHRRHKVCELHSKTPQVTIGGRKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQS 162 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MDWNLKTPSW DFTQLEQDVL KNLNTIGASS SFVEDRTTSG DFSIDLKLGQ VSNLGTKYAV 60 NEPGVLKMEP SKRARGSGNG AQPLSCLVDG CVSDLNNYRD YHRRHKVCEL HSKTPQVTIG 120 GRKQRFCQQC SRFHSLEEFD EGKRSCRKRL DGHNRRRRKP QSDSLSRSIL SHYQGSQLLP 180 FSSSHVYPST IVMNHSWRGI SNTEIDPRLH VQQEPIHFPD KHDIYLGASS NDSIHKIEKQ 240 VAFLQSDNPG SSVGLPFVRT VDFSENGGSR SKMFYDRFTT PSPGHESDCA LSLLSSLQTQ 300 SSGIGFNQAE QDRHLISFLQ PLDVSLGHHN RLETVSSVLN GCVSNADMNC SGMFHAASND 360 GGNEAPPPSL PFHWQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 160 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 3e-62 | SBP family protein |