PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515466.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 546aa    MW: 59867.7 Da    PI: 7.2469
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.43.5e-42171247278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q 
  XP_023515466.1 171 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQV 247
                     **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MESWSYVSEG KGCMSDEMNS PTSSLGRNKD SLLGWEFKHP CNFGSTMLPT GQHVENQGFG  60
EFIFPEMIGK QLADNSVCDI LSSKVVGGRY LTPSNAYLGE DESTSKLSGS VVDSTSRDSS  120
FIDLKLGRFA DHREAHGYKF FKGAPILASS ESSMPSKRVR ASGLNSQTYF CQVYGCNKDL  180
SSSKDYHKRH KVCEVHSKTA KVIVNGIEQR FCQQCSRFHL LAEFDDGKRS CRKRLAGHNE  240
RRRKPQVAIN SGRAGRFLQS YNGSRLQGTA LTATSFICQG ILPNGILNPE KYGTSDWCRT  300
VKIEDNNEYM PLAAVHAPTA HLHSKSLFDP YDIDTQVPPF HDNEPNPSAT NMFKDNSNQY  360
PLSVGGVNSS SRSYFHNPSL GSEYFSVYSA ASTDRLSGLS DSGCALSLLS SQTQNSSTHS  420
SGIPIGRPMV LLDGQNHYSM SQLSEKLMGV SSQVSVNGVS NKFDSSGLNA SEGCTLGPIS  480
TPETSDAVNL EITNRIFHES NLADPCEGGP TIDLLQLSSQ LHRVEHQRQA MQVKQESNAF  540
CCLRIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.14e-49SBP family protein