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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023515466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 546aa MW: 59867.7 Da PI: 7.2469 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.4 | 3.5e-42 | 171 | 247 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023515466.1 171 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQV 247 **************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 546 aa Download sequence |
MESWSYVSEG KGCMSDEMNS PTSSLGRNKD SLLGWEFKHP CNFGSTMLPT GQHVENQGFG 60 EFIFPEMIGK QLADNSVCDI LSSKVVGGRY LTPSNAYLGE DESTSKLSGS VVDSTSRDSS 120 FIDLKLGRFA DHREAHGYKF FKGAPILASS ESSMPSKRVR ASGLNSQTYF CQVYGCNKDL 180 SSSKDYHKRH KVCEVHSKTA KVIVNGIEQR FCQQCSRFHL LAEFDDGKRS CRKRLAGHNE 240 RRRKPQVAIN SGRAGRFLQS YNGSRLQGTA LTATSFICQG ILPNGILNPE KYGTSDWCRT 300 VKIEDNNEYM PLAAVHAPTA HLHSKSLFDP YDIDTQVPPF HDNEPNPSAT NMFKDNSNQY 360 PLSVGGVNSS SRSYFHNPSL GSEYFSVYSA ASTDRLSGLS DSGCALSLLS SQTQNSSTHS 420 SGIPIGRPMV LLDGQNHYSM SQLSEKLMGV SSQVSVNGVS NKFDSSGLNA SEGCTLGPIS 480 TPETSDAVNL EITNRIFHES NLADPCEGGP TIDLLQLSSQ LHRVEHQRQA MQVKQESNAF 540 CCLRIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 4e-49 | SBP family protein |