PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023513855.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

SBP

Protein Properties

Length: 282aa MW: 31408.9 Da PI: 7.8737

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023513855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.2	8.6e-42	158	235	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l+efD++krsCr+rLa+hn+rrrk+q+ XP_023513855.1 158 RCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHNRRRRKTQQ 235 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MLEYEWGSTN APPILLPGDE SEPAFNPEAP HSHHLPTFID HHHHNTFLPT LTPPPFTTHF 60 GGFDDHPHSF IMGPSHHYDT VVDAVHGGGV GGGEFVVVPK SEEVCRSITA VPVDFAARIG 120 LNLGGRTYFS SEEEEFVNQL YRRARTGGEP GSGNWSARCQ AEGCNADLSQ AKQYHRRHKV 180 CEFHSKASTV ITAGLTQRFC QQCSRFHVLT EFDNGKRSCR KRLADHNRRR RKTQQISNQG 240 SPKTQRLQTT TTTSSTEQSA WSVTVAVSPA KMSLECLSQR PY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	1e-63	SBP family protein