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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023511463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YC | ||||||||
Protein Properties | Length: 251aa MW: 28129.7 Da PI: 6.6798 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.1 | 3.5e-55 | 69 | 172 | 2 | 102 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 ++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflv XP_023511463.1 69 HQMFWANQmqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 163 689****988889********************************************************************************** PP NF-YC 94 divprdelk 102 di+prdelk XP_023511463.1 164 DIIPRDELK 172 ******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MDQSERSQHQ QQSQQPAGGV GGAGGAGTYS NPYQTAPLVA SGTPAITVPP TQLAFQQAQH 60 FHHHQQQQHQ MFWANQMQEI EQTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFAKA 120 CEMFILELTL RSWIHTEENK RRTLQKNDIA AAISRTDVFD FLVDIIPRDE LKEEGLGITK 180 ASIPVVGSPA DIPYYYVPSQ HPVGATGMIM GKQLDQANVY GATVQQPRPP MPFMPWPHTQ 240 PQQQQQQQQQ Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 141 | 147 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 2e-82 | NF-YC family protein |