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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022963398.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 631aa MW: 69587.3 Da PI: 7.0848 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.6e-16 | 289 | 348 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022963398.1 289 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 348 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.9 | 6.7e-15 | 391 | 442 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022963398.1 391 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 442 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 631 aa Download sequence |
MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSVPANL FHSPSQYNYG IYYGVDGEHG 60 GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI 120 ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ QHPTVAENEI 180 SGMKNWAVPR GYAATDNSSF EQKMVSFMSE NGGESGPINA MAYGDLQSLS LSMTMSPSSQ 240 SSCVTATQHV SPAMGDCSAM DSKKRIHEKL DQKQIVHRKS LDTFGQRTSQ YRGVTRHRWT 300 GRYEAHLWDN SCKKEGQSRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS THINFPLENY 360 QKELEEMKNM SRQEYVAHLR RRSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL 420 GTFSTQEEAA EAYDIAAIKF RGMNAVTNFD ITRYDVERII ASNTLLSGDV AKRKQQPDFN 480 NESLSESPPT HNSNAEASMP LPSQSSQSES DWKMALYQSS QQQLIPKPRL LSAITDDGSQ 540 LGVEDSAKMM GAHFSNASSM VTSCSLSSSR EESPDKTSLS MVFGMPQPTS RPFAAPASNM 600 NSSSSWIASA QQLRAANCMS QLPVFAGWTD T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-119 | AP2 family protein |