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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022963397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 640aa MW: 70557.4 Da PI: 7.3399 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.6e-16 | 289 | 348 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022963397.1 289 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 348 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 32.6 | 2e-10 | 408 | 451 | 9 | 55 |
AP2 9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022963397.1 408 HHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 451 456777****988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 640 aa Download sequence |
MNNVNGNNCN WLGFSVSPNV NMELSSSSAA AASPSVPANL FHSPSQYNYG IYYGVDGEHG 60 GFYSPLSVMP LKSDGSICSM EALSRQHPEA VSSSTPKLED FFGGATMGSH HYESNAREAI 120 ALSLDSIFCH QNPTHEPNNQ PYAHFSSLRS REVMLQDSKV ILPDGCNLQQ QHPTVAENEI 180 SGMKNWAVPR GYAATDNSSF EQKMVSFMSE NGGESGPINA MAYGDLQSLS LSMTMSPSSQ 240 SSCVTATQHV SPAMGDCSAM DSKKRIHEKL DQKQIVHRKS LDTFGQRTSQ YRGVTRHRWT 300 GRYEAHLWDN SCKKEGQSRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS THINFPLENY 360 QKELEEMKNM SRQEYVAHLR RRSSGFSRGA SIYRGVTRSN KSQLKALHHQ HGRWQARIGR 420 VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GMNAVTNFDI TRYDVERIIA SNTLLSGDVA 480 KRKQQPDFNN ESLSESPPTH NSNAEASMPL PSQSSQSESD WKMALYQSSQ QQLIPKPRLL 540 SAITDDGSQL GVEDSAKMMG AHFSNASSMV TSCSLSSSRE ESPDKTSLSM VFGMPQPTSR 600 PFAAPASNMN SSSSWIASAQ QLRAANCMSQ LPVFAGWTDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-116 | AP2 family protein |