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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022963031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 379aa MW: 42209.6 Da PI: 6.3578 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.3e-17 | 148 | 197 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022963031.1 148 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 197 78*******************......55************************997 PP | |||||||
2 | AP2 | 44.4 | 4.3e-14 | 240 | 290 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022963031.1 240 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 290 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MWDLNDCPDE RKEDESEGCW SAKTWIEGEG EEEKGKRVGS VSNSSSSAVL VEDGSDEDAP 60 TPNALLMQIN APSPVTRQFF PLQHPQISSS SSSPSPTTAS TFPQAHWVGV KFGHPDPFAA 120 PAPPNSIKST EISQPIKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT 180 AHAAARAYDR AAIKFRGVEA DINFSIEDYE EDLKQMGNLT KEEFVHVLRR QSTGFPRGSS 240 KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDTEIEAARA YDKAAIKCNG KEAVTNFDPS 300 IYQNELNPIS DSTANLGDHS LDLSLGNSSS NQNDTPKPSI DPHHSSSSSA PLSMEDDWQR 360 TQGFRRPQKN QVEQVEINI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-112 | AP2 family protein |