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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022962450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 676aa MW: 73673.1 Da PI: 6.9474 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.8e-16 | 309 | 368 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022962450.1 309 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 368 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 45.9 | 1.4e-14 | 411 | 462 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022962450.1 411 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 462 689***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 676 aa Download sequence |
MKSMNENENN NNNNNNNNNS SSWLGFSLSP HMKMEVTASD HPYNHHHSHS ATNAFYLSPH 60 YNNNTEIFYG IAENASLHHS AAASLSVMPL KSDGSLCIME ALSRSQTEGM VPSSSPKLED 120 FLGGATMGGR GYFNQNAESE PDREHSLDLL HRPIRENQQQ QILMQNTHQY YSGLVPSSIG 180 IGGCDPQILP ADDDEIPCLR NWVSRSHYAG AHNNLDQQIT GGGGGALVHD GGSGGNSVSI 240 GGMSCGELQS LSLSMSPGSQ SSSFTASGQI SLTGGDGAVV ETKKRGPGKL CQKQPVHRKS 300 IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD 360 LAALKYWGPS THINFPLENY QTELEEMKNM SRQEYVAHLR RKSSGFSRGA SVFRGVTRHH 420 QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ISRYDVERIM 480 ASNTLLAGEL ARRNKEVVVD PRTDAAAAAV AYDSSVASNN NGGIEMNPDG NGTDWKMALY 540 QNPSHQQHQQ GAATCVAESL DHHHNKSMAS SGDYPNASFS MALQNLIGIE ALNTTNSHGI 600 EDDLNKQVTH FSNSSSLVTS LSSSREGSPD KANASMASKL IGATSGVGSW YPTPQQLRPT 660 AISMAHLPVF AAWNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-128 | AP2 family protein |