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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022957354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 409aa MW: 45252.9 Da PI: 8.8101 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.8e-17 | 135 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022957354.1 135 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 184 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MMMLNLNDSI MNRDEATTDR IVMEDSETSN SSVVNADEVC NSRDEESSVL IFDILKKESP 60 CGVGGGPVPE LVTQALFPVA GGWGDSGSPI LRTQWLNLSP TADSGGGGGQ PELKTVQPKQ 120 QQVRKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI 180 KFRGVDADIN FNISDYDEDM KQTKNLNKEE FVHVLRRQSS GVSRGGSKLR GLSVQRYGRW 240 ETQMNQIIGK KGTEERSETT VEASNGGNGH NLDLSIGGIF NYHFSNSSPK LNIERPKNEN 300 NGYAHGMGGQ QPNTPPSVFS GFYSAFLPRN QERGRETINK ESTGWRWQTA RSIEGNVNEE 360 KKKTIESHGS KSAASSGFSP SHNFGSFYAQ NNTPLHTNHC LPTPYTNIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 7e-55 | AP2 family protein |