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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022953877.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 364aa MW: 41115.4 Da PI: 7.3888 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.5 | 5e-16 | 49 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ g k+ ++++lg ++ +e Aa a++ a++k++g XP_022953877.1 49 SVYRGVTRHRWTGRYEAHLWDkNCWnEGqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 108 78*******************999963367556*************************98 PP | |||||||
2 | AP2 | 51.2 | 3.1e-16 | 151 | 202 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022953877.1 151 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 202 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MAKISHPPHK NSISTTANSQ SSTVHHSQKK VLKRTRKSTP RDAPAQRSSV YRGVTRHRWT 60 GRYEAHLWDK NCWNEGQNKK GRQVYLGAYD DEEAAAHAYD LAALKYWGTE TVLNFPLLTY 120 QDELKEMEGQ SREEYIGYLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL 180 GTYATQEEAA TAYDMAAIEY RGLNAVTNFD LSRYIKYLRP EEQDIPNNNN RPPSPNAGKT 240 TSELDPKSLL EFTFPSQCSS SDQPISTPPL GPDGGDSSSS SSSNTLELLL HSSKFKDIIE 300 RKPTADPPQT PPESDRPRRC IPDDIQTYFD CTQDSDDIAE GDDGIFGYLN SFLPSSIFHY 360 ALDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79700.2 | 2e-98 | AP2 family protein |