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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022951054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 523aa MW: 57698.3 Da PI: 9.4374 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.4 | 2.7e-16 | 225 | 284 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022951054.1 225 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 284 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.3 | 1e-14 | 327 | 378 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022951054.1 327 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 378 689***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MNNKNKIKNM NMNMNMKSMN DHNNGWLGFY GIPDSSAAAA AAMHLKSDAP LRLMGPLSTS 60 QNQGMVPNSS PKLEDFLGGA TMADREHSLD LQNQEHHHIL IQNSHPYYSA LVPSDPQILP 120 IDENEIRSLR NWVSPPYYAA TPHNTLEQHI TGGGGGSASI AGMSSGELQS LSLSMSPGSQ 180 STSFTAPGQI SSTAAVETKK RGPGKLCHKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE 240 AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLENYQTEL 300 EEMKNMSRQE YVAHLRRKSS GFSRGASVFR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 360 TQEEAAEAYD IAAIKFRGVN AVTNFDICKY DVERIMASST LLAGEQARRN KEVDTTVAPN 420 NNGTNSNSTT DWKTALYNNQ QQQSIAALGG YRNASFTMAL QDLIGTESLT SASQFSNSSS 480 LVTREGSPEK TKVAAVNGVS SWYPWPAAIA MAHLPVFAAW NDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-128 | AP2 family protein |