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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022949745.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 519aa MW: 57702.2 Da PI: 5.888 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.7e-17 | 150 | 199 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022949745.1 150 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 199 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.6e-14 | 242 | 292 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022949745.1 242 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 292 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 519 aa Download sequence |
MWDLNDCPDV REGDESEACS SAKTSIEGDG DDDKRKRVGS ASNSSCSAAE EEEELEEEEE 60 EEEGSDEVLG SMVMQIDTQT PSPVTRQFFP LEDTEIPPPL PLPTTDSAFP RAHWVGVKFG 120 HPDPNNNSIN PNDLSHPIKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD CGKQVYLGGF 180 DTAHAAARAY DRAAIKFRGV EADINFSIED YEDDLKQMGN LTKEEFVHVL RRQSTGFPRG 240 SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEIEAA RAYDKAAIKC NGKEAVTNFD 300 PSIYESELNP TTDSTSNLAD HSLDLSLGNS SSKQHDSPNG SLDPHHSSSA PLPMEADWQR 360 SQGFRPPQLN LLQESSSGGG SGNKNYNNAQ RGNTNRYLEC ETMQLLSQTH IQSPISFEMQ 420 RHGQFRRQAG GVDQPHSQIL LHNQNHPTFN YQFPGSSNGG RIIGSDLSLS LSDHQNQVVE 480 SGPSQVHATA AASSGFSPQI RPSKNWLHKN GFHCLIRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-114 | AP2 family protein |