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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022948462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 516aa MW: 57844.6 Da PI: 6.2368 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.2 | 2.7e-15 | 194 | 253 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022948462.1 194 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 253 789******************655454478446*************************98 PP | |||||||
2 | AP2 | 46.6 | 8.2e-15 | 298 | 347 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022948462.1 298 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 347 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 516 aa Download sequence |
MSNWLGFSLT PHLKIHDATS ADDQHPNPSS FPPLMPLRSD GSLCIAAAHD WRSYENEMGA 60 RNEEESPKLE DFLGNCYSNS PPNDQTHNNN TNFIQANTNN NYHYQTDHHS LISNNGNAIY 120 KSWLGPTTSS PQNECGFRSL SLGMSPNSHN DIVSLPSPPH VAVDSRKRPM PVGKPPVKEP 180 VPRKSIDTFG QRTSQFRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA 240 ARAYDLAALK YWGPTTHINF SLSTYENELE EMKNMTRQEF VANLRRKSSG FSRGASMYRG 300 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGTSA VTNFDISRYD 360 VKRICSSSTL IASDLAKRSP LKDGIPSTAE EYSACASPTS SQPLLAITEN GDVDESQQEL 420 VDMVWCDNGG KDDNNQQEEN VAKNLMGSRN ETEASKCCMV QNNGEFGVGV GGGEYSQGYY 480 SMEEAKYEDG RDENREVEND VTLAHHQVPM FALWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-126 | AP2 family protein |