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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022948216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 477aa MW: 51876.3 Da PI: 7.2246 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.3e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022948216.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 205 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MFDLNLNVDS VDATQKEDSV VFFEKLPQGS GNHVDESGTS NSSIVNADTS SNGGDDDSCS 60 TRAGGELFTL NFEILKAGST NDMVTKEFFP LGGAVSAEFG IPQGHKSASS SSSSSRKNWI 120 DLACNRSSSA GEGRTVQPVQ PQPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFNVSDYEED LKLMENLSKE EFVHILRRQS 240 TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKAYDKAAIK CNGREAVTNF EPSTYEGEGV 300 SEGSSEGGRS MLDLNLGISP PSNCQKDDNG HLRFQSGPCF PNDRSTMMES NARAAVGDPP 360 VNGLVMTSEH APLWNGTQSS FFPSEESMTE KRLALGSSQG VPNWAWQIHG PINAAQMPLF 420 STAASSGFSF SATHFPAAMP PPHQPSSIAQ NIHFNSPKAS LNSAQYHHLL NQQHAPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-115 | AP2 family protein |