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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022948215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 492aa MW: 53604.2 Da PI: 6.9184 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.5e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022948215.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 205 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.9 | 5e-13 | 248 | 298 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g XP_022948215.1 248 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIKCNG 298 89********.7******...5...334336**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence |
MFDLNLNVDS VDATQKEDSV VFFEKLPQGS GNHVDESGTS NSSIVNADTS SNGGDDDSCS 60 TRAGGELFTL NFEILKAGST NDMVTKEFFP LGGAVSAEFG IPQGHKSASS SSSSSRKNWI 120 DLACNRSSSA GEGRTVQPVQ PQPVKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFNVSDYEED LKLMENLSKE EFVHILRRQS 240 TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKYIYLGLFD SEVEAARAYD KAAIKCNGRE 300 AVTNFEPSTY EGEGVSEGSS EGGRSMLDLN LGISPPSNCQ KDDNGHLRFQ SGPCFPNDRS 360 TMMESNARAA VGDPPVNGLV MTSEHAPLWN GTQSSFFPSE ESMTEKRLAL GSSQGVPNWA 420 WQIHGPINAA QMPLFSTAAS SGFSFSATHF PAAMPPPHQP SSIAQNIHFN SPKASLNSAQ 480 YHHLLNQQHA PP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-127 | AP2 family protein |