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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022944693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 610aa MW: 67355.4 Da PI: 6.8566 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.9 | 2.9e-14 | 180 | 239 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022944693.1 180 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 239 57*******************666664477446**********99*************98 PP | |||||||
2 | AP2 | 46.9 | 6.9e-15 | 284 | 333 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022944693.1 284 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 333 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 610 aa Download sequence |
MGSMNSNNWL SFPLSPTNPS LPPHLQTPTH AHHFSLGNLE NDNMDIPFQT HEWNLISGQG 60 GGEVPKVADF LGVSKAENEA DLIGFNQIHE ANDTDYLFPI TRLVPLQQHP TPAAAPINMD 120 STTNYDPQDN SNSLQSLTLS MGSGKPSTCE TSSTPDNANN NTTLDVTPRR TLDTFGQRTS 180 IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEDKAARAY DLAALKYWGT 240 STTTNFPISN YEKEVEEMKH MTRQEFVASI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI 300 GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI LESNTLPIGG 360 GAAKRLKEAQ AIESSRKRDE MIALGSSSSF QYGSSSSSSN SSNHRLQQQQ QPSYPLLQQP 420 NLNMDHHHHH HHHHLQTQPF LSLQNHHDIS QYTNDPSSFH HSSTYMHTQL QLHHHQSDNA 480 PYPNNNNNNH QFYGGAGGGY LHNHPGLLHG MINMGGGGGG SNLESSNNNN NALSSANHFE 540 NPNNNSNGGY LGNAFGMGST SATANNGAPA EEYALVKVDY DMPPNAGGYG SWSGDSVQGS 600 NPGVFSMWND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 0.0 | AP2 family protein |