PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022943407.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 474aa    MW: 51399.1 Da    PI: 7.5468
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022943407.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.2e-17156205155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022943407.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 205
                     78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MFDLNLNVDS PDATPNEDSV LFFEKLPQGS GNQMDESGTS NSSIVNADTS SNGGDDDSCS  60
TRAGGELFMI NFGILKSGSA NDVVTKELFP IGGTVNPDFG ILQGHNSASS SSNSSRKNWI  120
NLAFDRSGSA GEGRMIQPVQ PQPAKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ  180
VYLGGFDTAH SAARAYDRAA IKFRGVDADI NFILSDYEED LKQMKNLSKE EFVHILRRQS  240
TGFSRGSSKY RGVTLHKCGR WEARMGQLLG KKAYDKAAIQ CNGREAVTNF EPSTYGERVS  300
EGSSEGCRIM LDLNLGISPL SIDNRPKDNE GHLRFQSGPC YANDMSTMIE SNADAAVSDP  360
SLKGPVMASG HVPLWNGLQQ SCLLPSEERV TDKRHALGSS QGVVPNWAWQ IHNQGNATQL  420
PLFSAAASSG FSFSAIPAAI LPPCQPGSTA HNLHFTSAKA SPNSPQLNPQ QPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-122AP2 family protein