![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022942874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 513aa MW: 56427.2 Da PI: 6.7111 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.8e-14 | 235 | 294 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022942874.1 235 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEDKAARAYDLAALKYWG 294 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 50.2 | 6.6e-16 | 337 | 388 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022942874.1 337 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 388 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 513 aa Download sequence |
MAPATNWLSF SLSPIEMLRS ADSQFVPYET SSTASPHYLL DNFYSNNGWS NSTNAHPKSS 60 SQLFFMDGDE NNEVIKEDHH NQSTPAIYTS YLHPQTHHQP KLEDFLGDSS SMVRYSDSQT 120 ETQDSSLTHI YDHGSAPYFG DQQDLKTIAA FRAFSGNSGS EVDDSASMGR TQIAAGAHSI 180 ESSVRNELGT FSSCPTGALS LAVAQSSDTV AAGGVVAVDS DSSKKIADTF GQRTSIYRGV 240 TRHRWTGRYE AHLWDNSCRR EGQARKGRQV YLGGYDKEDK AARAYDLAAL KYWGPTATTN 300 FPVSNYAKEL EEMKHVTKQE FIASLRRKSS GFSRGASIYR GVTRHHQQGR WQARIGRVAG 360 NKDLYLGTFA TEEEAAEAYD IAAIKFRGLN AVTNFEMNRY DVEAIAKSAL PIGGAAKRLK 420 LCLESDQKQI SNHDQAAQCS SGSNSINFGA PIQSMPPIPC GIPYDTAAML YHHNYFHHLQ 480 PNPLGSSEST TPAIGASTMA PQAAEFFVWP HQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10510.2 | 0.0 | AP2 family protein |