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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022942115.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 364aa MW: 40020.2 Da PI: 7.5775 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.1e-17 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022942115.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MLNLNDLIIN CDETSTNRTV MEDSETSNSS VVNADEVCNS RDEDSSVLIF NILKRENSGG 60 GGGGASRELV TQALFPVAGG WGETGSPVPK SHWLNLSSTG DFGGEGVGGG TAELKIVQQK 120 QQQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGVNADI NFNISDYDED MKQLKNLSKE EFVHVLRRQS TGFSRGGSKL RGLSLQKYGR 240 WETQTSPLMT KNEIEERSTM VDANNGGNGH NLDLSIGGIF NYHLRNSSQN LNIQTPKKEN 300 NGGGGYGVGG QQPHIPPMWS GFCSGFLADN QKREEKLPVK DPYELGMANG NADIDADVGS 360 RKWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 2e-56 | AP2 family protein |