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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022940241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 476aa MW: 54002.7 Da PI: 9.2703 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 189 | 248 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022940241.1 189 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 248 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 51.7 | 2.1e-16 | 291 | 342 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g XP_022940241.1 291 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 342 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
MPNSFLASQH YNGDLVSPLS VMPLNSDGSL CFMESLSTLQ PQEMLPNISP KLEDFLGSAN 60 HGREATALSL DSIYYNQNDG AEAVSERQHC LNLFKQQEQH ILFGMFQFPA EDANKESLIA 120 SHSYEIRHAM EQPIDRMSSQ DVEPLSLSMS PGSQSSCVTA TMETKKRGLL GRKKPVHRKL 180 IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD 240 LAALKYWGPS THLNFPLKSY QVEIEEMKNM NRQEYVAHLR RKSSGFSRGA SIYRGVTRHH 300 QHGRWQARIG RVAGNKDLYL GTFGTQEEAA EAYDIAAIKF RGTNAVTNFD TSRYNVERIM 360 ASSSLLSREI ARRNKEHKLT NAIERKEPTQ NINQIDPSEI SNSNNIVWRS AFDNTMLLDR 420 NTTIESIERK LVTSCGYLNH LMGVETATVK DSRKFKAHFS NASVSLPVMS SVRNDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-141 | AP2 family protein |