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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022935073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 498aa MW: 54797.9 Da PI: 6.5134 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.3e-17 | 149 | 198 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022935073.1 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 198 78*******************......55************************997 PP | |||||||
2 | AP2 | 42.9 | 1.2e-13 | 275 | 325 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a++k +g XP_022935073.1 275 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALKCNG 325 89********.7******5553..2.26**********99**********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence |
MLDLNLQVVS SDSVELVTER LFQFPPIRME SAGSFNGDLS ASTTGDEDSS SNADEAFPFA 60 FGKDCAVQEN LTAKSLCISD NQRDQTMELF PLTGGLSSGS SSQKQWLEVS PPEFHYWGGA 120 LERRITAPPG QQQHQPMRKN RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD 180 TAHAAARAYD RAAIKFRGVD ADINFNVSDY DEDIKQVGLA KLILITVRTS NSFSNAIDEE 240 LYSWLPLMSQ MSNFTKEEFV HILRRHSTGF SRGSSKYRGV TLHKCGRWEA RMGQFLGKKY 300 IYLGLFDSEI EAARAYDKAA LKCNGKEAVT NFEPSSYVAE MASEAAGTAD NNQILDLNLG 360 IAPPNLCEAQ SESIAMFERR AMPENSVSAA IRSSHSEPYS FAVPSNYHSP WSVSNSSFFP 420 NSRERATEMR MGVGVGVGSW EWQIHGHPSG TTSVPLFSAA ASSGFPSSSS SSSSSTAIPS 480 ASSGVGETHF PAIFYCRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 5e-91 | AP2 family protein |