![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022934409.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 396aa MW: 45107.3 Da PI: 8.2863 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.9 | 3.2e-15 | 69 | 128 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_022934409.1 69 SRFRGVSRHRWTGRFEAHLWDkLSWNMtqkKKgKQVYLGAYDEEESAARAYDLAALKYWG 128 789******************888865666447************************987 PP | |||||||
2 | AP2 | 56.8 | 5.7e-18 | 171 | 222 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++gt eeAa+a++ a+ +++g XP_022934409.1 171 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTYGTQEEAARAYDMAAIEYRG 222 89****99***********99654...4*************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 396 aa Download sequence |
MEAAALVLKN EENLRICWTG GQAQAIRRVK RRRREPAAAA AAAADQTNKQ QSVKQQSDQG 60 PTTTMKRSSR FRGVSRHRWT GRFEAHLWDK LSWNMTQKKK GKQVYLGAYD EEESAARAYD 120 LAALKYWGVT TITNFPVSEY EKEIETMQTM TKEEYLASLR RKSSGFSRGV SKYRGVARHH 180 HNGRWEARIG RVYGNKYLYL GTYGTQEEAA RAYDMAAIEY RGINAVTNFD WSNYMAWLKP 240 PPVPPAALND VHTTSNPDKE LCNSRSIPVE ETSMFENNHY DSDLFHSLQK QDLLESCSTP 300 INGYAKSSSP SALDLLLRSS FFKKLVETNS SLSVDDADNG EETKTHMQLN SVFDEFGDVF 360 GDRLTDEQFV CSSNKDLQES ELHSYFNGMF HRFKAA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 27 | 35 | RRVKRRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-94 | AP2 family protein |