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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022934375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 434aa MW: 47585.1 Da PI: 8.3277 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.1e-17 | 75 | 134 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022934375.1 75 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 134 57*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MASSSSDPGF KHEPGSCSAA AAVAGGGAAE SSEVVMANDQ LLLYRGLKKA KKERGCTAKE 60 RISKMPPCAA GKRSSIYRGV TRHRWTGRYE AHLWDKSTWN QNQNKKGKQV YLGAYDEEEA 120 AARAYDLAAL KYWGPGTLIN FPVTDYSRDL EEMQNVSREE YLASLRRKSS GFSRGISKYR 180 GLSSRWDPSF SRVPGPEYIN SINYGAGDDQ ATEGEFVPGF CIEKKIDLTS HIKWWGPNKT 240 RTASAGSKSS EEDKHSSCAG EVGSELKALG QTTRPTEPYE MPCLGTLHDV KKTTSRVSAL 300 SILSRSAAYK SLQEKALKLQ EINNENDENE NKNTVNKIDH GKVVETHTSH GGDPSERYGV 360 AFGTSGGLPL QRNMFPLTSF LTAPLLSSYN TVDPLGDPIH WTSLVSVLPT GLSRAAEVTK 420 TETSSTYTLF QPEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-162 | AP2 family protein |