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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022933148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 628aa MW: 68489.2 Da PI: 6.7785 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.6 | 3.7e-14 | 261 | 320 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022933148.1 261 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEQKAARAYDLAALKYWG 320 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 46.9 | 7e-15 | 363 | 414 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022933148.1 363 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 414 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 628 aa Download sequence |
MASINWLGFS LSPQHHQLPH HPSDHPHAVS AAAFTTDQIS ASDVPAVCFD NLPSSYGVYD 60 SQDWNSVKGL GQTQSSDFSG LIDTHHQPKL ENFLGHHSFT DHDHPAAVYT NASANYIFQN 120 CSLELPSEPN GGSGDGGGRP NPSNGNYTSS IGLSMIKTWL RNQPAPPQAV AKSGGDHDGA 180 VAKPNITNPH TLSLSMNTGP PPPPSQSSDS EALPLLVTNG GESSSSDKKQ PKSSATEVDT 240 ENSAIEAVPR KSMDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGRQVYLGG 300 YDKEQKAARA YDLAALKYWG TTTTTNFPIS DYEKELEDMK HMTRQEFVAS LRRKSSGFSR 360 GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN 420 FDMTRYDVKA ILESNTLPVG GAAKRLKDID HSNIPLHLQS TEENISSHLS NGIITTGGGG 480 WPTLAFHHHH HPYASHYPYG ALQQRLWCKQ ENDVTAGNFL DSMDQSSGSS SVVYSRDGYG 540 GNFMIPMGAE GGGLGDIGEV NMFGGGCNVD DPFHATRTSN LYDYNNSSHQ LQQPPPELQA 600 SSGNNWLPPA RSVCHGGTPP PFTIWNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17430.1 | 1e-127 | AP2 family protein |