![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022929460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 457aa MW: 50341.9 Da PI: 6.7222 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.8 | 1.5e-14 | 181 | 240 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g XP_022929460.1 181 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEDKAARAYDLAALKYWG 240 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 50.4 | 5.6e-16 | 283 | 334 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022929460.1 283 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 334 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 457 aa Download sequence |
MAPQPPTPPP TNWLSFSLSP IEMLRSTDSP FLPYEPPSTA SPHYLLDSFY SNNGWSGSAN 60 SHHNHEPKLE DFLGDSSPMM RYSDSQTETQ DSSLTHIYDH AYFGDQQDFK TIAAFQAFSG 120 NSGSEVDDSV SITRTQIAAA EIPTGALSLA VVQSSDTASA VVAVDSDSSK KIADTFGQRT 180 SIYRGVTRHR WTGRYEAHLW DNSCRREGQA RKGRQVYLGG YDKEDKAARA YDLAALKYWG 240 PTATTNFPVS NYAKELDEMK HVTKQEFIAS LRRKSSGFSR GASIYRGVTR HHQQGRWQAR 300 IGRVAGNKDL YLGTFATEEE AAEAYDIAAI KFRGLNAVTN FEMSRYDVEA IAKSALPIGG 360 AAKRLKLCLE AEQKPILNHD QAIQCSNGTN NMNLGTAIPS IPCGIPYDTA AMLYHHNYYH 420 LQPNAIGSSE STSPAIAAPV TLGPQAAEFF VWPHQSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10510.2 | 1e-167 | AP2 family protein |