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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022928656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 391aa MW: 44880.1 Da PI: 8.4314 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.6 | 4.2e-15 | 63 | 122 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_022928656.1 63 SRFRGVSRHRWTGRFEAHLWDkLSWNLtqkKKgKQVYLGAYDEEESAARAYDLAALKYWG 122 789******************888844555447************************987 PP | |||||||
2 | AP2 | 56.8 | 5.6e-18 | 165 | 216 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++gt eeAa+a++ a+ +++g XP_022928656.1 165 SKYRGVARHHHNGRWEARIGRVYG---NKYLYLGTYGTQEEAARAYDMAAIEYRG 216 89****99***********99654...4*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MEAPALILKN EENLRICWTE GQVPATRRVK RRRRDPSTAS AIDQTNNKQQ SDQAPTTTTK 60 RSSRFRGVSR HRWTGRFEAH LWDKLSWNLT QKKKGKQVYL GAYDEEESAA RAYDLAALKY 120 WGVTTITNFQ ISDYEKEIEM MQTMTKEEYL ASLRRKSSGF SRGVSKYRGV ARHHHNGRWE 180 ARIGRVYGNK YLYLGTYGTQ EEAARAYDMA AIEYRGINAV TNFDWSNYMA WLKPPLPPVA 240 TPNESHMTSD PLKELCNSSS IIPAEETSLF QNHHYHDNSF HSLQKQELLH KSCSIPLNSY 300 VKSSPSALNL LLRSSFFKKL VETNSNLSVD EADNGEEAKT RAVLDNVFDE FGDVFCDRLT 360 DETFVCSSDK ELQESDLHSF LNGSFHRFKA P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 35 | RRVKRRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.1 | 3e-92 | AP2 family protein |