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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 462aa MW: 50710.7 Da PI: 7.1192 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.4 | 4.6e-15 | 252 | 303 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022926923.1 252 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 303 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence |
MNSSSSSNSS SSSSSSSSSS SSNWLAFSLS NNPNSLSLFH HPNPPDLSIF SPKLEDFLRG 60 ASTPPPLPPP FQFSPHQTPL TYCEESEICD SDLKTIAASF LRGSPSQFPE QHLHQHLHAP 120 PPHPLPDTLT NPPPPPPKKS VDTFGQRTSI YRGILMWVFI FLRLVLVIGR DLSLLPWMDS 180 HFSSVYLGGY DKEEKAARAY DLAALKYWGP TTTTNFPVSD YEKDLENMKN MTRQEFVASL 240 RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 300 FRGLNAVTNF DISRYDVKSI ASSNLPIGGM SATKSKPTTD SAASEDREVH HSPVSSTATL 360 LPSHPNTSTL TFGMPPIKQD PSDQYWSMFG YNVPPPTSSS SFTMFQQPSN PASTMFPPVA 420 DLPPTASPPL PEGGAYEQHQ QFAAPIALSR ASLFQTPIFG IE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-106 | AP2 family protein |