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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 664aa MW: 72809.9 Da PI: 6.8465 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.7 | 1.9e-15 | 314 | 373 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g RWR95902.1 314 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 373 78*******************655454478446*************************98 PP | |||||||
2 | AP2 | 47.3 | 5.3e-15 | 416 | 467 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RWR95902.1 416 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 467 78****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 664 aa Download sequence |
MGHPCGWTSH RRSAYYVVMC GPPDDPSSAN PHVELHAPEL RSLEGGGRSE GREDDGCCYE 60 QRFGGGGEDG EFSHLSAMPL RSDGSLCSLE AFKKPDGEWR YDQSITNPNK EGPKLEDFLG 120 GYSNTTQELN NNNESSNQVS QSISSFNQLY YQNPQTFNQR DHDPNPRINV NIPPTLSNST 180 PDIEQEENLT DPSSSNLIQA FHHPHHYNNN QTLIPTTHFQ NPNPSNGLYH VALDGAATSI 240 SGFKSWLRQQ NPFPPDKSPA DSAGKCSQPL SLSMNGGSPS SSAAADERKR PAGRSLAKEP 300 IPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA 360 ARAYDLAALK YWGPTTHINF PLSTYEKELE EMKNMTRQEF VAHLRRKSSG FSRGASVYRG 420 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVSA VTNFDISKYD 480 VKRICSSTTL IAGDLAKRSP RDSPAVVSTE DGQDHSSLPP QFPLAITNGS TDELASMACH 540 NINQQHYEPN SSNRLGSDGV QLISTSSTLN SSGPGSPKNS GAYQTDGGVE KATMMLYDCS 600 GAGGGGFGES PKSIYFPSIA PKYEGVKGNG SNDNASGEGG NWMPVARSEP AAVHQLPMFA 660 LWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-130 | AP2 family protein |