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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 410aa MW: 44693.9 Da PI: 8.5379 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.8 | 2.6e-13 | 85 | 141 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g RWR92001.1 85 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 141 57*******************6666777775555599******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MASSPSSSDP PVLKIEAAAA TAGGGGGGGG SGGGGGGGGG EASEALMATD RLLFRGLKKA 60 RKERVCTAKE RISKMPPCAA GKRSSIYRGV TRHRWTGRYE AHLWDKSTWN QNQNKKGKQG 120 AYDDEEAAAR AYDLAALKYW GPGTLINFPV SDYSRDLEEM QMVSREDYLA SLRRPQSSRW 180 ETSLGRILGN ENFNSLNCST SEDAATENEY TGTFFLERKI DLTNYIRWWG PKKIRRSDPI 240 TKSSDETHGI SDAGSELKTF EWPLQHTEPY QLPSLGLSCK GKPFASAMSA CRILAQSSAF 300 KKLQEKASEA QDDGEHKNNI GHEKTVLKLS SVGGSESSGV GLSLGEMPLQ KTPYPLGPFL 360 SAPLLTNCNN IDPSPDSAFW TNLIQPTGLS LSTTHRKNEI SSTYTFFRQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-113 | AP2 family protein |