PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 410aa    MW: 44693.9 Da    PI: 8.5379
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.82.6e-1385141155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  RWR92001.1  85 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 141
                 57*******************6666777775555599******************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MASSPSSSDP PVLKIEAAAA TAGGGGGGGG SGGGGGGGGG EASEALMATD RLLFRGLKKA  60
RKERVCTAKE RISKMPPCAA GKRSSIYRGV TRHRWTGRYE AHLWDKSTWN QNQNKKGKQG  120
AYDDEEAAAR AYDLAALKYW GPGTLINFPV SDYSRDLEEM QMVSREDYLA SLRRPQSSRW  180
ETSLGRILGN ENFNSLNCST SEDAATENEY TGTFFLERKI DLTNYIRWWG PKKIRRSDPI  240
TKSSDETHGI SDAGSELKTF EWPLQHTEPY QLPSLGLSCK GKPFASAMSA CRILAQSSAF  300
KKLQEKASEA QDDGEHKNNI GHEKTVLKLS SVGGSESSGV GLSLGEMPLQ KTPYPLGPFL  360
SAPLLTNCNN IDPSPDSAFW TNLIQPTGLS LSTTHRKNEI SSTYTFFRQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-113AP2 family protein