PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89763.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 712aa    MW: 79309.6 Da    PI: 6.4748
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-18220270255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+++AeIrdps +g  +r++lg+f ta eAaka+++a+ +++g
  RWR89763.1 220 HFRGVRQRP-WGKFAAEIRDPSRRG--ARVWLGTFETAVEAAKAYDRAAFQMRG 270
                 69*******.**********97665..*************************98 PP

2AP255.21.8e-17560610255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd s +g  +r++lg+f ta eAa+a+++a+ +++g
  RWR89763.1 560 HYRGVRRRP-WGKFAAEIRDSSRRG--ARVWLGTFETAVEAARAYDHAAFQMRG 610
                 7********.**********43343..*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    
MSQSIITKRR FIAPGPGLLG ETRESERERP KQSSRSSSMT NVNEAALNLI RQHLLGDFDS  60
FLDDQTARMS VKTEILTQES DCFSSPIWQQ KPEISSDFSQ LETSPTCFQT SESMEEVKDS  120
NDSGFQFLPF LDQNISILEQ EADFLFANTE SQSQQLNYRD SKNQAFPDLE EIPNPPHQKI  180
SAKSSKSSFS DRRPGLKISL PPVTKVELPE SVAASGEKQH FRGVRQRPWG KFAAEIRDPS  240
RRGARVWLGT FETAVEAAKA YDRAAFQMRG SKAILNFPLE AGKWEEPVVA GRKRPRETDS  300
GMGAEEQQKK HVKKETPLGS GSVGSSAGIP LTPSGWTGLW EGLDLTAFNV PPLSPLSPHP  360
SFGYPQLTKN PLDLIHKHLS FMANVLDLIQ KHLLDDFESF LHDQTPRISV KTEGSDCFSS  420
SPFWQQQKSE IFSDFSQLGT IPACFHTSES KEEAKDSNND SEFEFLPFLE QNNSFFEHDN  480
LFFSNTESQP QQLNLRDSKN QEFADSEKKP NPQHLKTTAK SSFSDRRPSL EISLPPVTKL  540
ELLETAAPPS SAAASDEKRH YRGVRRRPWG KFAAEIRDSS RRGARVWLGT FETAVEAARA  600
YDHAAFQMRG RKAILNFPLE AGKWDEPVVA CRRRRRETES GVGAEEQQKP VKKGKSSAPP  660
ESGSVGSSAG IPLTPSGWTG FWDGLDLTAI NAPPLSPLSP HPPLGYAQLT VI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.15e-41ERF family protein