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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 712aa MW: 79309.6 Da PI: 6.4748 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.5e-18 | 220 | 270 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdps +g +r++lg+f ta eAaka+++a+ +++g RWR89763.1 220 HFRGVRQRP-WGKFAAEIRDPSRRG--ARVWLGTFETAVEAAKAYDRAAFQMRG 270 69*******.**********97665..*************************98 PP | |||||||
2 | AP2 | 55.2 | 1.8e-17 | 560 | 610 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd s +g +r++lg+f ta eAa+a+++a+ +++g RWR89763.1 560 HYRGVRRRP-WGKFAAEIRDSSRRG--ARVWLGTFETAVEAARAYDHAAFQMRG 610 7********.**********43343..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 712 aa Download sequence |
MSQSIITKRR FIAPGPGLLG ETRESERERP KQSSRSSSMT NVNEAALNLI RQHLLGDFDS 60 FLDDQTARMS VKTEILTQES DCFSSPIWQQ KPEISSDFSQ LETSPTCFQT SESMEEVKDS 120 NDSGFQFLPF LDQNISILEQ EADFLFANTE SQSQQLNYRD SKNQAFPDLE EIPNPPHQKI 180 SAKSSKSSFS DRRPGLKISL PPVTKVELPE SVAASGEKQH FRGVRQRPWG KFAAEIRDPS 240 RRGARVWLGT FETAVEAAKA YDRAAFQMRG SKAILNFPLE AGKWEEPVVA GRKRPRETDS 300 GMGAEEQQKK HVKKETPLGS GSVGSSAGIP LTPSGWTGLW EGLDLTAFNV PPLSPLSPHP 360 SFGYPQLTKN PLDLIHKHLS FMANVLDLIQ KHLLDDFESF LHDQTPRISV KTEGSDCFSS 420 SPFWQQQKSE IFSDFSQLGT IPACFHTSES KEEAKDSNND SEFEFLPFLE QNNSFFEHDN 480 LFFSNTESQP QQLNLRDSKN QEFADSEKKP NPQHLKTTAK SSFSDRRPSL EISLPPVTKL 540 ELLETAAPPS SAAASDEKRH YRGVRRRPWG KFAAEIRDSS RRGARVWLGT FETAVEAARA 600 YDHAAFQMRG RKAILNFPLE AGKWDEPVVA CRRRRRETES GVGAEEQQKP VKKGKSSAPP 660 ESGSVGSSAG IPLTPSGWTG FWDGLDLTAI NAPPLSPLSP HPPLGYAQLT VI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 5e-41 | ERF family protein |