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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR85885.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 437aa MW: 47723.2 Da PI: 6.843 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.3e-17 | 146 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++k++grW+++I+d + k+++lg f+ta Aa+a++ a+ k++g RWR85885.1 146 SQYRGVTFYKRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDLAAIKFRG 195 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence |
MLLDLNLTTE KLPEAFGGQL DESVTLSSSI VNADASINGG GDDDSSSTNP GEVSMFSFDI 60 LKRGRFDVEE EEEANRVSRE VVTRELFPVG GGAGDGFRST ESSSRPHWAA LGFCRADAGE 120 QMPGKVVAAA PPAAKKSRRG PRSRSSQYRG VTFYKRTGRW ESHIWDCGKQ VYLGGFDTAH 180 AAARAYDLAA IKFRGVEADI NFNLSDYEDD LKQMRNLSKE EFVHVLRRQS TGFSRGSSKY 240 RGVMLHKCGR WEARMGQFLG KKAYDRAAIQ CNGRVAVTNF DPSTYKGELV SEADSAGIAN 300 NLDLNLGISL PSVACNEKVR DGSMDFHFNS NPFEAQKAKM ESSASVTMDQ PHCLRVAAEH 360 PPLWTGGYPC FFPNFKESLM GKVESGSPSF SNWAWQLQGS TAVPLLSSAA SSGFSATTTT 420 TAALPPHTTC HYPPYYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-97 | AP2 family protein |