PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85885.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 437aa    MW: 47723.2 Da    PI: 6.843
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.3e-17146195155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+++k++grW+++I+d      + k+++lg f+ta  Aa+a++ a+ k++g
  RWR85885.1 146 SQYRGVTFYKRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDLAAIKFRG 195
                 78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MLLDLNLTTE KLPEAFGGQL DESVTLSSSI VNADASINGG GDDDSSSTNP GEVSMFSFDI  60
LKRGRFDVEE EEEANRVSRE VVTRELFPVG GGAGDGFRST ESSSRPHWAA LGFCRADAGE  120
QMPGKVVAAA PPAAKKSRRG PRSRSSQYRG VTFYKRTGRW ESHIWDCGKQ VYLGGFDTAH  180
AAARAYDLAA IKFRGVEADI NFNLSDYEDD LKQMRNLSKE EFVHVLRRQS TGFSRGSSKY  240
RGVMLHKCGR WEARMGQFLG KKAYDRAAIQ CNGRVAVTNF DPSTYKGELV SEADSAGIAN  300
NLDLNLGISL PSVACNEKVR DGSMDFHFNS NPFEAQKAKM ESSASVTMDQ PHCLRVAAEH  360
PPLWTGGYPC FFPNFKESLM GKVESGSPSF SNWAWQLQGS TAVPLLSSAA SSGFSATTTT  420
TAALPPHTTC HYPPYYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-97AP2 family protein