PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR85884.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 452aa    MW: 49636 Da    PI: 6.0293
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR85884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.5e-17146195155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  RWR85884.1 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 195
                 78*******************......55************************997 PP

2AP239.41.5e-12238287154
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 s+y+GV+ +k  grW+A+   +     +k+++lg f+ + eAa+a+++a+ + +
  RWR85884.1 238 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDRAAIQCN 287
                 89********.7******5553..2.26**********99*********98765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MLLDLNLTTE KLPEAFGGQM DESGTSNSSI VNADASINGG GDDDSSSTNP GEVSMFSFDI  60
LKRGRFDVEE EEEDNRVSRE VVTRELFPVG GGAGDGFRST ESSSRPHWAA LGFCRADVGE  120
QMPGKVVAQP PPAAKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH  180
AAARAYDRAA IKFRGVEADI NFNLSDYEDD LKQMRNLSKE EFVHILRRQS TGFSRGSSKY  240
RGVTLHKCGR WEARMGQFLG KKYIYLGLFD NEVEAARAYD RAAIQCNGRE AVTNFDPSTY  300
EGELVSEADS AGIANNLDLN LGISLSSVAC NEKVRDGSMD FHFNSNPFEA QKAKMESSAS  360
VTMDQPHCLR VPAEHPPLWT GGYPGFFPNF KESLMGKVES GSPSFSNWAW QLQGSTAVPL  420
LSSAASSGFS ATTATTAALP PHTTCHYPPY YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-115AP2 family protein