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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 526aa MW: 58285.6 Da PI: 7.1356 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 143 | 192 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RWR83006.1 143 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHLAARAYDRAAIKFRG 192 78*******************......55************************997 PP | |||||||
2 | AP2 | 39.7 | 1.2e-12 | 235 | 285 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g RWR83006.1 235 SKFRGVTLHK-CGRWEAR---M---GqllGKKYVYLGLFDSETEAARAYDKAAIKHNG 285 79********.7******...5...334336**********99**********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence |
MWDLNDSPNQ RREDPDVCFY EKNTSLDADD DMDKRVCLGS SSNDNSISSV VVLEASDEDD 60 RERKSSSCKI FGFSVNGDGE EDLGEAVVTR QFFPAENDGI PLPLPHWAGV KFCQSEPAAA 120 GKSAADLAQP IKKTRRGPRS RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHLAA 180 RAYDRAAIKF RGVGADINFT LDDYEDDLKQ MSSLTKEEFV HVLRRQSTGF PRGSSKFRGV 240 TLHKCGRWEA RMGQLLGKKY VYLGLFDSET EAARAYDKAA IKHNGRDAVT NFNPSMYENE 300 SNMSGNADHN LDLSLGSLAS KSNNFKSVDG ERLSWSNQRP QVAMELDLRM GGQPIKPRFD 360 EKLQLLSSNS PRQDPEWWGE TNNPQPFGHT TTLQQLNPSS YPVGRPIAPI WPSAVTFSHQ 420 NLQTQFHNSN QVPQSTGNIG SVQLLAGDDP ARNGGGGGLP LTTGEQISTQ QRQLNWGRSS 480 SNWAASAAPT PQLFVTSAAS SGFPSHIMKQ PSWLQQKGLH SLMRPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-109 | AP2 family protein |