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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 668aa MW: 73165 Da PI: 6.8187 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.9 | 1.8e-11 | 320 | 376 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+ ++ a++k++g RWR82908.1 320 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARSYDLAALKYWG 376 78*******************77776664346655.77******************98 PP | |||||||
2 | AP2 | 45.6 | 1.7e-14 | 421 | 470 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RWR82908.1 421 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 470 9***************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 668 aa Download sequence |
MKSMNNNNWL GFSLSPHLNI ELSGDPHHHH HQRTQTTADS AAAASAAPTR FLLAPHHLNS 60 SGLCYGAETG NGSLYSQLSV MPLKSDGSLC IMEALSRSQQ GGMVLSSNPK LEDFMGTHQY 120 GNNDRESMSL SLDGSNMYYQ QNSEPENSRQ HSLGFLHPFR QPFQAQLHPY FQPLQEGMCS 180 GLTSHGMYQT PLEEGTKESQ LAGCNLQLTS VADDSGLKSW VTRLNATDHS LGEKMGVFFG 240 DEGGGSASVG AIAGYEELRS LSLSMSPGSQ SSCVTASQQI SPAGTVECAA IDTKKRGNEV 300 VGHKQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR KGRQGGYDME 360 EKAARSYDLA ALKYWGPSTH INFPLDNYHD ELEEMKNMSR QEYVAHLRRK SSGFSRGASM 420 YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG VNAVTNFDIT 480 RYDVERITAS STLLAGELAK RNREVVVGNE SIEHCTPAQK SSGEPELTEE SNGGSDWKMV 540 LSQSSPQQSQ TADELDQSPI SYTNHKNPSL SSTFHDLIST DTVSLTAGVE DSTKMAMTNL 600 SNSSSLVTSL SSSREGSPDR TGLSTLFVKP PSSKFISSPP LNSWIPSTQL SPAISMAHLP 660 VFASWTDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-124 | AP2 family protein |