PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82908.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 668aa    MW: 73165 Da    PI: 6.8187
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.8e-11320376155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++gr++A+++d  ++  g  rk  + g ++ +e+Aa+ ++ a++k++g
  RWR82908.1 320 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARSYDLAALKYWG 376
                 78*******************77776664346655.77******************98 PP

2AP245.61.7e-14421470355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  RWR82908.1 421 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 470
                 9***************988532...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MKSMNNNNWL GFSLSPHLNI ELSGDPHHHH HQRTQTTADS AAAASAAPTR FLLAPHHLNS  60
SGLCYGAETG NGSLYSQLSV MPLKSDGSLC IMEALSRSQQ GGMVLSSNPK LEDFMGTHQY  120
GNNDRESMSL SLDGSNMYYQ QNSEPENSRQ HSLGFLHPFR QPFQAQLHPY FQPLQEGMCS  180
GLTSHGMYQT PLEEGTKESQ LAGCNLQLTS VADDSGLKSW VTRLNATDHS LGEKMGVFFG  240
DEGGGSASVG AIAGYEELRS LSLSMSPGSQ SSCVTASQQI SPAGTVECAA IDTKKRGNEV  300
VGHKQPVHRK SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR KGRQGGYDME  360
EKAARSYDLA ALKYWGPSTH INFPLDNYHD ELEEMKNMSR QEYVAHLRRK SSGFSRGASM  420
YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG VNAVTNFDIT  480
RYDVERITAS STLLAGELAK RNREVVVGNE SIEHCTPAQK SSGEPELTEE SNGGSDWKMV  540
LSQSSPQQSQ TADELDQSPI SYTNHKNPSL SSTFHDLIST DTVSLTAGVE DSTKMAMTNL  600
SNSSSLVTSL SSSREGSPDR TGLSTLFVKP PSSKFISSPP LNSWIPSTQL SPAISMAHLP  660
VFASWTDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-124AP2 family protein