PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81783.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 430aa    MW: 47804.2 Da    PI: 6.4499
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.2e-17149198155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  RWR81783.1 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 198
                 78*******************......55************************997 PP

2AP241.92.5e-13241291155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+++ +g
  RWR81783.1 241 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEIEAARAYDKAALQCNG 291
                 89********.7******...5...334336**********99**********98765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MFDLNLAMEK LPEVAGVHVD DSGTSNSSVV NTEASINGGG DEDSCSTLNE RCGELSLFSF  60
DILKKRNCDV VVVEEEEEEE DNGVLTGFVT RQLFPVDGRE IAEGSSSSRP HWADLSREAL  120
NTGGQVQGMV MPQQQVVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD  180
TAHAAARAYD RAAIKFRGVD ADINFNLTDY EDDMKPMKNL TKEEFVHILR RQSTGFSRGS  240
SKYRGVTLHK CGRWEARMGQ LLGKKYIYLG LFDSEIEAAR AYDKAALQCN GREAVTNFEP  300
STYEGEIMSE ADTSGQFLLS HSNAFPHTEN PASVTRGQLH CLTRAPEHPP AWNGLYPGFS  360
PNLKERAVER AELHPPPLPN WAWQLQGSSA MPLFPSAASS GFSTTTATTA AFPPLHPQSN  420
GHFPTYCYRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-109AP2 family protein