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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 430aa MW: 47804.2 Da PI: 6.4499 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.2e-17 | 149 | 198 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RWR81783.1 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 198 78*******************......55************************997 PP | |||||||
2 | AP2 | 41.9 | 2.5e-13 | 241 | 291 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+++ +g RWR81783.1 241 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEIEAARAYDKAALQCNG 291 89********.7******...5...334336**********99**********98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MFDLNLAMEK LPEVAGVHVD DSGTSNSSVV NTEASINGGG DEDSCSTLNE RCGELSLFSF 60 DILKKRNCDV VVVEEEEEEE DNGVLTGFVT RQLFPVDGRE IAEGSSSSRP HWADLSREAL 120 NTGGQVQGMV MPQQQVVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD 180 TAHAAARAYD RAAIKFRGVD ADINFNLTDY EDDMKPMKNL TKEEFVHILR RQSTGFSRGS 240 SKYRGVTLHK CGRWEARMGQ LLGKKYIYLG LFDSEIEAAR AYDKAALQCN GREAVTNFEP 300 STYEGEIMSE ADTSGQFLLS HSNAFPHTEN PASVTRGQLH CLTRAPEHPP AWNGLYPGFS 360 PNLKERAVER AELHPPPLPN WAWQLQGSSA MPLFPSAASS GFSTTTATTA AFPPLHPQSN 420 GHFPTYCYRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-109 | AP2 family protein |