PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77575.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 537aa    MW: 58885.2 Da    PI: 7.9727
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-17156205155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  RWR77575.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205
                 78*******************......55************************997 PP

2AP240.56.7e-13248298155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+++GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  RWR77575.1 248 SKFRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDKAAIKCNG 298
                 79********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MWDLNDSPDQ TRATPDGYCS EKVSPDGDDD RGKRVGVGSS SNDNSSSSAV VIEASDEDER  60
DGKSSSSSKI FGFSVPIPDD AVVTHQFFPT EKGDEAGAEV VAAAASAARG ATLPFPRAHW  120
VGVRFCHPET VGTGKAAVDV SPPIKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ  180
VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFSLDDYEED LKQMSNLTKE EFVHVLRRQS  240
TGFPRGSSKF RGVTLHKCGR WEARMGQFLG KKYVYLGLFD SEIEAARAYD KAAIKCNGKE  300
AVTNFDPSIY ENELSSASGD ADHNLDLSLG NLGSKRNNFE IVEEERLPAL DQQPQVAMEL  360
DWRMGSRSIK PRFDDKLKLP TSNPHRQDPE GRMEPVDMVP FSHVRIQSPV PFNTNHQFRR  420
GGETPMLHFI QRQFSPPSYQ FLGSGGDGAR TRGGGLSLAT GEQQPQQQRQ LGWGRNSSYW  480
PSSSSSPHSA AAAAAAATAT PPQLFATAAA SSGFPSQTVK PPGWLQKNGF HSLMRPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-113AP2 family protein