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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR77575.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 537aa MW: 58885.2 Da PI: 7.9727 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 7e-17 | 156 | 205 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RWR77575.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.5 | 6.7e-13 | 248 | 298 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g RWR77575.1 248 SKFRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEIEAARAYDKAAIKCNG 298 79********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 537 aa Download sequence |
MWDLNDSPDQ TRATPDGYCS EKVSPDGDDD RGKRVGVGSS SNDNSSSSAV VIEASDEDER 60 DGKSSSSSKI FGFSVPIPDD AVVTHQFFPT EKGDEAGAEV VAAAASAARG ATLPFPRAHW 120 VGVRFCHPET VGTGKAAVDV SPPIKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFSLDDYEED LKQMSNLTKE EFVHVLRRQS 240 TGFPRGSSKF RGVTLHKCGR WEARMGQFLG KKYVYLGLFD SEIEAARAYD KAAIKCNGKE 300 AVTNFDPSIY ENELSSASGD ADHNLDLSLG NLGSKRNNFE IVEEERLPAL DQQPQVAMEL 360 DWRMGSRSIK PRFDDKLKLP TSNPHRQDPE GRMEPVDMVP FSHVRIQSPV PFNTNHQFRR 420 GGETPMLHFI QRQFSPPSYQ FLGSGGDGAR TRGGGLSLAT GEQQPQQQRQ LGWGRNSSYW 480 PSSSSSPHSA AAAAAAATAT PPQLFATAAA SSGFPSQTVK PPGWLQKNGF HSLMRPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-113 | AP2 family protein |