PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR73933.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 654aa    MW: 72342.4 Da    PI: 6.8471
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR73933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.6e-16303362155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  RWR73933.1 303 SQYRGVTRHRWTGRYEAHLWDnTCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 362
                 78*******************988886678446*************************98 PP

2AP246.59.4e-15405456155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  RWR73933.1 405 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 456
                 57****************988532...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MKSMNSNNNW LGFSLSPHHM NMEITTDPHH HHQAQSSAAA SATAPTGFYL SPQMNNSGIY  60
YGVEAENGGY YSHLPVMPLK SDGSLCIMEA ISSSHQEGMM PSSSPKLEDF MGTHQYSSND  120
REPMALSLDS IYYQQHQEAE NSRQHSQELL QPFRQQIQAQ HPYFQPLQEG IYMPGHEMYQ  180
TPLGEESKEA QMADFTLQLP PIAEDGISGF KSWVARHYSP GGCLGNEGGS GAVGGGIGYG  240
DLQSLSLSMS PGSQSSCVTA PQQISHAETE CGVTDTKKRG NGKVGQKQPV HRKSIDTFGQ  300
RTSQYRGVTR HRWTGRYEAH LWDNTCKKEG QSRKGRQVYL GGYDMEEKAA RAYDLAALKY  360
WGPSTHINFP LDNYRVELEE MKNMSRQEYV AHLRRKSSGF SRGASIYRGV TRHHQHGRWQ  420
ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVSAV TNFDITRYDV ERITASSTLL  480
SADLAKRTKE IKTSNETLAS LPSIQSSTVE PGLTNDQNGS SNWKMALYQS SPQELQTSEP  540
LDQKPMNAAN YRNPSFSGAL HDLIGIDAVH STEGIDDSCK MAMTNLSNAS SLVTSLSSSR  600
EGSPDKVGLS MPFPRPPEAK YIDSTPLSSW VPSNQFRPAI SMAHMPLFAT WNDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-126AP2 family protein