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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR73933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | AP2 | ||||||||
Protein Properties | Length: 654aa MW: 72342.4 Da PI: 6.8471 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.6e-16 | 303 | 362 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g RWR73933.1 303 SQYRGVTRHRWTGRYEAHLWDnTCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 362 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.5 | 9.4e-15 | 405 | 456 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g RWR73933.1 405 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 456 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 654 aa Download sequence |
MKSMNSNNNW LGFSLSPHHM NMEITTDPHH HHQAQSSAAA SATAPTGFYL SPQMNNSGIY 60 YGVEAENGGY YSHLPVMPLK SDGSLCIMEA ISSSHQEGMM PSSSPKLEDF MGTHQYSSND 120 REPMALSLDS IYYQQHQEAE NSRQHSQELL QPFRQQIQAQ HPYFQPLQEG IYMPGHEMYQ 180 TPLGEESKEA QMADFTLQLP PIAEDGISGF KSWVARHYSP GGCLGNEGGS GAVGGGIGYG 240 DLQSLSLSMS PGSQSSCVTA PQQISHAETE CGVTDTKKRG NGKVGQKQPV HRKSIDTFGQ 300 RTSQYRGVTR HRWTGRYEAH LWDNTCKKEG QSRKGRQVYL GGYDMEEKAA RAYDLAALKY 360 WGPSTHINFP LDNYRVELEE MKNMSRQEYV AHLRRKSSGF SRGASIYRGV TRHHQHGRWQ 420 ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVSAV TNFDITRYDV ERITASSTLL 480 SADLAKRTKE IKTSNETLAS LPSIQSSTVE PGLTNDQNGS SNWKMALYQS SPQELQTSEP 540 LDQKPMNAAN YRNPSFSGAL HDLIGIDAVH STEGIDDSCK MAMTNLSNAS SLVTSLSSSR 600 EGSPDKVGLS MPFPRPPEAK YIDSTPLSSW VPSNQFRPAI SMAHMPLFAT WNDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-126 | AP2 family protein |