PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR72001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 651aa    MW: 70329.2 Da    PI: 6.24
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR72001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.13.3e-11273329155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  RWR72001.1 273 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 329
                 57*******************4444.2455535555.779999**************98 PP

2AP2461.3e-14374423355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  RWR72001.1 374 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 423
                 9***************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    
MGSMNNWLAF SLNSQELPPQ SQSHAPQAFS SGLGFNSNEV VSSCEVSSDN FDLPSDSTVG  60
QFGILDAYNR THQPQDWSME GGETHFKTGS DLSMIVGSSS NQNLNQGEPK LEDFLGGHSY  120
ANSCNYMYSN CSMQQLPSQT TMVEMPTNGC GDGINSSSSN TIGLSMIKTW LRSQPAPTQP  180
ESKNDAGGSG DVTGSIGASA NAQALSLSMS TGSQSSTPLP LLTASGGGRS LGGGESSLEN  240
KQEANSSNAL DSQTGAIEAV PRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG  300
QTRKGRQGGY DKEEKAARAY DLAALKYWGS TTTTNFPISN YERELEEMKN MTRQEYVASL  360
RRKSSGFSRG ASMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK  420
FRGLNAVTNF DMSRYDVKSI IESTTLPIGG AAKRLKEAEQ LESSMNGRRM GNNIASQLTD  480
GISSYGSHHP GWPAAAFQQG QPLSMQYPYD PQRGWLKQEP DNFVASHGLH GLQQLHLGNP  540
HNMLQPPIMP NPNVMSLEQL ALEQSSGSNS VIYGGGGSGS NGDYQGAMGG SGGYIMPINT  600
VIADQGQQQN NGNFGDQNML ASADSYAGRN MYYNNMGVGQ GAPIFSVWND T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226234GGGRSLGGG
2227235GGGRSLGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-128AP2 family protein