PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR71998.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family AP2
Protein Properties Length: 631aa    MW: 68207.7 Da    PI: 5.5917
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR71998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23.2e-11270326155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  RWR71998.1 270 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 326
                 57*******************4444.2455535555.779999**************98 PP

2AP235.91.8e-11358403755
         AP2   7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 r++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  RWR71998.1 358 RRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 403
                 899*********988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
MNNWLAFSLN SQELPPQSQS HAPQAFSSGL GFNSNEGVSS CEVSSDNFDL PSDSTVGQFG  60
ILDAYNRTHQ PQDWSMEGGE THFKTGSDLS MIVGSSSNQN LNQGEPKLED FLGGHSYANS  120
CNYMYSNCSM QQLPSQTTMV EMPTNGCGDG INSSSSNTIG LSMIRTWLRS QPAPTQPESK  180
NDAGGSGDVT GSIGASANAQ ALSLSMSTGS QSSTPLPLLT ASGGGRSLGG GESSLENKQE  240
ANSSNALDSQ TGAIEAVPRK SIDTFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQTR  300
KGRQGGYDKE EKAARAYDLA ALKYWGSTTT TNFPISNYER ELEEMKNMTR QEYVASLRRH  360
HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGLNAVTNF DMSRYDVKSI  420
IESTTLPIGG AAKRLKEAEQ LESSMNGRRM GNNIASQLTD GISSYGSNHP GWPAAAFQQG  480
QPLSMQYPYD PQRGWLKQEP DNFVASHGLH GLQQLHLGNP HNMLQPSIMP NPNVMSLEQL  540
ALEQSSGSNS VIYGGSGSGS NGDYQGAMGG SGGYIMPINT VIADQGQQQN NGNFGDQNML  600
ASADSYAGRN MYYNNMGVGQ GAPIFSVWND T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223231GGGRSLGGG
2224232GGGRSLGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-112AP2 family protein