PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007746.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 631aa    MW: 69699.4 Da    PI: 5.9107
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS397.41.5e-1212516262374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                      ++L++c+ea++s++ +l+++l+++l  +asp+g +p++Rl+ay+teALa r++r ++++++  pp+e ++   +++  al+l++evsPi+kf +
  XP_023007746.1 251 LSVLMACVEAIRSKNITLINHLIEKLGSQASPRGsSPITRLIAYYTEALAVRVSRVWPQVFHVRPPREYNR-IDDDTGIALRLLNEVSPIPKFIY 344
                     579*******************************99**************************999999984.567777889************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taN+++l+a+eg+++vHiiDfdi++GlQWp+L+q+LasR ++p ++RiTg+g+    sk+el+etg+rLa fAe+l++pfef++ v++rled++
  XP_023007746.1 345 FTANEMLLRAFEGKDKVHIIDFDIKEGLQWPSLFQSLASRVNPPSHVRITGIGE----SKQELNETGDRLAGFAEALRLPFEFHA-VVDRLEDVR 434
                     ******************************************************....***************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l++L+vk++E++ Vn++lqlh++l ++       + +++L l++s++P++vv++eqea+hn++++ +r++ +++yy a+fdsl+++lp++s+ r 
  XP_023007746.1 435 LWMLHVKENESVGVNCILQLHKTLYDNNINGGggALKDFLGLIRSTNPRIVVMAEQEAEHNDPRLETRVAATIKYYGAIFDSLDTSLPPNSSGRL 529
                     ***********************97776665578999********************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsek.aakqaklllrkvk.sdgyrveee....sgslvlgWkdrpLvsvS 371
                     k+E++ +grei+n++ ceg+er erh  +ekW++ +e+  G++ v ++++ +  q + ll++++  dg++v +      ++++l W+++pL+svS
  XP_023007746.1 530 KIEEM-FGREIRNMIGCEGRERYERHVGFEKWKKVMEKqGGLRCVGIRDDrELLQSQILLKMYSsADGFNVRKIgeggAQAVCLAWEEQPLYSVS 623
                     *****.******************************87489******8752678*****************965445577788************ PP

            GRAS 372 aWr 374
                      W+
  XP_023007746.1 624 GWT 626
                     **5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
MLAGCSSSTL LSPRNHLRSE VVQSPFQACL LQFPPSMSAQ RLDLPCSFSH SKDASSVVRS  60
PSIRPVALSV EKQSIRLPPL SAANQQIKQE FWNGKGKNLK RIAEQVGIDD DDESSISNAK  120
RKRACRDDIG DGLILSQFGG GVRSFWYHQQ PDGDEGLCFL PGSSTSPFMS EIADLGEGND  180
GESSQVKAQD SSDSVSGSDS GSSSSSGSER FAAAEAGPEI GNGSSRNPSY HHHQGSGSEN  240
ERGEEESFEL LSVLMACVEA IRSKNITLIN HLIEKLGSQA SPRGSSPITR LIAYYTEALA  300
VRVSRVWPQV FHVRPPREYN RIDDDTGIAL RLLNEVSPIP KFIYFTANEM LLRAFEGKDK  360
VHIIDFDIKE GLQWPSLFQS LASRVNPPSH VRITGIGESK QELNETGDRL AGFAEALRLP  420
FEFHAVVDRL EDVRLWMLHV KENESVGVNC ILQLHKTLYD NNINGGGGAL KDFLGLIRST  480
NPRIVVMAEQ EAEHNDPRLE TRVAATIKYY GAIFDSLDTS LPPNSSGRLK IEEMFGREIR  540
NMIGCEGRER YERHVGFEKW KKVMEKQGGL RCVGIRDDRE LLQSQILLKM YSSADGFNVR  600
KIGEGGAQAV CLAWEEQPLY SVSGWTAAEI S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein