PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007720.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 727aa    MW: 79557.2 Da    PI: 6.0648
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS325.51e-993667262374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+   ++ ++  pp+  ++ +++ ++ a+k+fse+sP+++f ++
  XP_023007720.1 366 LDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLM--NNPVNPPPPRCPTPVDVIFKMGAYKVFSEISPLVQFVNF 458
                     679*************************************************98..6777788999999999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     t+Nqa+lea++   r+Hi+Dfdi+ G+QW++++q+L+ R++g +sl+iT+++sp++++  el  ++e+L++fA+ +g++fef+++   ++++l+ 
  XP_023007720.1 459 TCNQALLEALDDVGRIHIVDFDIGFGAQWASFMQELSLRNQG-ASLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFDMI---NFDSLNQ 549
                     ***************************************888.89***************************************9...5555544 PP

            GRAS 192 eeL.....rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     +++     r +++Ea+aVn+ l   ++ ++++ l+s    +L+++k+lsPk+vv  ++ +d+++ +F +++l+al+ y  l++sl+a    +s++
  XP_023007720.1 550 NSFslpfsRANENEAIAVNFPL--CSTSNQPALLPS----LLRFIKQLSPKLVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAI-NMNSDA 637
                     4442233344459******998..666667888887....*********************************************887.7899** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +k+Er+ll+++i++ v  + ++     e++  W+  + +aGF+pv++s+++++qa+++ ++++++g++ve++++slvl+W++r+L+s+SaWr
  XP_023007720.1 638 VNKIERFLLQPRIESTVLGRLRA----PERMPLWKTLFASAGFTPVNFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWR 726
                     ******************99998....999**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    
MRGISFHFQG KGDLEISAAL SSSPICSGFA EKWVKKGEEH QELEEQQEGF SYFLLPNNEP  60
TSVLHMRSPS PPTSVSTLSS SFGGGGGGGG GCVPSLPPET PSVEPLAGAG VGNAIFSSGL  120
EDLESMWSET AGPEQSFLRW IAGDVEDSSM GSKNPFDFDG NAGIGIVEQG SEFGRGAGNV  180
LANINPNLSF PVPACGGANY KSSSLGMNNR HGNLNLQSPI FNGSLENVVV PVSGLIQPFE  240
RPDEKPQSLN AAQVLLNQHQ HQHPQNPSFF VPLMFGQQEQ QLQPQLKRHN SSGALDANPN  300
GPIPIPNEIL MRNHQVQVLQ QQQLGYAPGL QCLPQQKAMS PKPKVVGLGD EMAYNNPPQQ  360
QQHALLDQLY KAAELVGTGN FSHAQGILAR LNHQLSPVGK PLQRAAFYFK EALQLLLLMN  420
NPVNPPPPRC PTPVDVIFKM GAYKVFSEIS PLVQFVNFTC NQALLEALDD VGRIHIVDFD  480
IGFGAQWASF MQELSLRNQG ASLKITAFAS PSTHHPIELG LMRENLTQFA NDIGISFEFD  540
MINFDSLNQN SFSLPFSRAN ENEAIAVNFP LCSTSNQPAL LPSLLRFIKQ LSPKLVVSLD  600
RGCDRSDLPF PQHMLQALQS YINLLESLDA INMNSDAVNK IERFLLQPRI ESTVLGRLRA  660
PERMPLWKTL FASAGFTPVN FSNFTETQAE CVAKRTSVRG FHVEKRQASL VLCWQRRELI  720
SASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-122GRAS family protein