PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007603.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 363aa    MW: 41745.9 Da    PI: 6.9593
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.31.2e-12363621373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+++s++d+  a+++L+ +s ++sp+gd++qRl +yf   L++rl +    ++++ ++ +     ++   + +  +++++P+++f+h
  XP_023007603.1   6 LRQLLIRCAHFISQSDFLSAHRFLSIISSNSSPYGDATQRLLHYFSSSLSHRLPS----CSSSSSSFQ-----EDGLQSCYLSLNQITPFIRFCH 91 
                     689***************************************************9....332222222.....3344456667************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...vak.rl 186
                     ltaNqaIlea+e + +vH++Dfdi +G+QWp+L+qaLa+R + +p+lRiT++g     + ++l +tg+rL+kfA++lg++f+f++l     + ++
  XP_023007603.1  92 LTANQAILEAIEDCGMVHVVDFDIIHGVQWPPLMQALAERFA-SPMLRITAIGL----DLTSLLKTGDRLSKFAHSLGLRFHFHPLlllN-DhDV 180
                     ****************************************65.59*********....9**************************97633.3489 PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     + l + +L + p+EalaVn+vl lhrll      ++   ++L+ +k l+Pkvv+++e+ea+ n++ F++rfleal++ys +fdslea++p++s+e
  XP_023007603.1 181 DRLVPAALTLFPDEALAVNCVLYLHRLL------KDDLWRLLHKIKALNPKVVTIAEKEANFNHPLFMQRFLEALNHYSLIFDSLEATMPQNSKE 269
                     9999***********************9......333456******************************************************* PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     r  vE++++grei +vv+ eg++rr+rhe++e+W+ +l++ GF+++pls +a +qaklllr ++ s+gy+++  ++sl+lgW++rpL+svS+W
  XP_023007603.1 270 RLDVEQVWFGREIDDVVSEEGNKRRQRHERYESWEIMLKSLGFSNIPLSPFALSQAKLLLRLHYpSEGYHLQTLHDSLFLGWQNRPLFSVSSW 362
                     ********************************************************************************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MDPFQLRQLL IRCAHFISQS DFLSAHRFLS IISSNSSPYG DATQRLLHYF SSSLSHRLPS  60
CSSSSSSFQE DGLQSCYLSL NQITPFIRFC HLTANQAILE AIEDCGMVHV VDFDIIHGVQ  120
WPPLMQALAE RFASPMLRIT AIGLDLTSLL KTGDRLSKFA HSLGLRFHFH PLLLLNDHDV  180
DRLVPAALTL FPDEALAVNC VLYLHRLLKD DLWRLLHKIK ALNPKVVTIA EKEANFNHPL  240
FMQRFLEALN HYSLIFDSLE ATMPQNSKER LDVEQVWFGR EIDDVVSEEG NKRRQRHERY  300
ESWEIMLKSL GFSNIPLSPF ALSQAKLLLR LHYPSEGYHL QTLHDSLFLG WQNRPLFSVS  360
SWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-121GRAS family protein