PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007113.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 382aa MW: 42183.1 Da PI: 8.3825

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.6e-05	144	167	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+ + +L++H+ H XP_023007113.1 144 FPCTACGEIFPKPQLLEQHQAAkH 167 89******************8777 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MAPTATGSFC NKFLALLLLI LHVGCFLLNN GDNRHRRHRP LQPKKRNESP PTPLSLKPQK 60 ALTSSISFLK RIFSSKTCKM AIETTRPSTP ARSSQHSIVT FIPQPVDTPN SKNTNPIDSA 120 GTPQDSDITT AEINQFFPLR NDIFPCTACG EIFPKPQLLE QHQAAKHAVS ELADSDSGKN 180 IVRIIFETGW TSREVSPKIL RILKIHNSQK ILSRFEEYRE SVKAKAARNG GAVKRWDERC 240 IADGNELLRF HCSTFLCDLG QNGNSSICGQ QFCSICGIIK SGFSHKLDGI STLSSSWRAH 300 VAIPEDIEEE FKFMNVKRAI LVCRVVAGRI GSDNDEPEKD GGGFDSVVGR SGSGAQTTVD 360 EEELLVFNPR AVLPCFAIVY EV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MAPTATGSFC NKFLALLLLI LHVGCFLLNN GDNRHRRHRP LQPKKRNESP PTPLSLKPQK  60
ALTSSISFLK RIFSSKTCKM AIETTRPSTP ARSSQHSIVT FIPQPVDTPN SKNTNPIDSA  120
GTPQDSDITT AEINQFFPLR NDIFPCTACG EIFPKPQLLE QHQAAKHAVS ELADSDSGKN  180
IVRIIFETGW TSREVSPKIL RILKIHNSQK ILSRFEEYRE SVKAKAARNG GAVKRWDERC  240
IADGNELLRF HCSTFLCDLG QNGNSSICGQ QFCSICGIIK SGFSHKLDGI STLSSSWRAH  300
VAIPEDIEEE FKFMNVKRAI LVCRVVAGRI GSDNDEPEKD GGGFDSVVGR SGSGAQTTVD  360
EEELLVFNPR AVLPCFAIVY EV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-112	C2H2 family protein