PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006996.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 500aa    MW: 56674.3 Da    PI: 5.7987
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.46.1e-971134843374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +l+++ A a+ +++++++q+l++ l+el sp+gd  q+la+yf++A+ +++++s++++y++l++ +++++  ++   ++  f+evsP+++f+h++
  XP_023006996.1 113 TLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVA 207
                     578999********************************************************9999886665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.rledlel 191
                      N  I+ea+ege+++HiiD++ s ++QWp++l+aLasR++++p+lR+T+++  + ++k++++e+ +r++kfA+ +gvpf+f++++ + ++++l++
  XP_023006996.1 208 SNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVV-ARSDKKMMREISRRMEKFARLMGVPFKFKAIYYSgDISQLNF 301
                     **************************************************99.55799**************************7777******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                      eL v+ +Eala+n+v +  ++     +++++rd +++l+  l+P++++vve+ ad+  ++ +F++ + e+l+++ + fdsl+ ++p++s+e+ +
  XP_023006996.1 302 TELGVNDDEALAINCVGAFRSVT----PVDNRRDFLISLFGALRPRIITVVEEQADLdsDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLM 392
                     *****************998886....888889*********************999434559******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee....sgslvlgWkdrpLvsvSaWr 374
                     +Er+  gr+iv+++a + ae +er+et+++W +rl+e GFkpv++se++++++++llrk+k dg++v ++    ++ ++l Wk++++v++ aW+
  XP_023006996.1 393 LERA-AGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYK-DGWTVLDDgegaDAGIFLAWKGQAVVWAAAWT 484
                     ****.********************************************************.99999977666688899**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MPFQIKPTKF PLFSPVLQVF LLMDTLFRLV SNLQPSDQSY NSSTSSKNSV DLQNHCFLNP  60
PPPEQCFTSS FMVDQPHFSA SSSSNHRPDK DHVHQDHEYI NVNLEFSNGW ASTLIVQTAI  120
AIVDNNASQI QQLMWMLNEL GSPYGDIDQK LAFYFLRAMF SHVTNSGERC YQTLAMVSEK  180
RSCFASMRRM VLKFQEVSPW MTFGHVASNG VIMEAFEGEK KLHIIDISNS FCTQWPTFLE  240
ALASRSDETP HLRLTTLVVA RSDKKMMREI SRRMEKFARL MGVPFKFKAI YYSGDISQLN  300
FTELGVNDDE ALAINCVGAF RSVTPVDNRR DFLISLFGAL RPRIITVVEE QADLDSDGVD  360
FVKDVQECLR WFRVYFDSLD GSFPSTSDEK LMLERAAGRA IVDLLARAPA ECVERRETAA  420
RWARRLHEGG FKPVSFSEDV NDDVRALLRK YKDGWTVLDD GEGADAGIFL AWKGQAVVWA  480
AAWTPEPLDG EKSRQSSCSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-148GRAS family protein