PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006995.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 513aa    MW: 58164.9 Da    PI: 5.6421
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS316.36.6e-971264973374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +l+++ A a+ +++++++q+l++ l+el sp+gd  q+la+yf++A+ +++++s++++y++l++ +++++  ++   ++  f+evsP+++f+h++
  XP_023006995.1 126 TLIVQTAIAIVDNNASQIQQLMWMLNELGSPYGDIDQKLAFYFLRAMFSHVTNSGERCYQTLAMVSEKRSCFASMRRMVLKFQEVSPWMTFGHVA 220
                     578999********************************************************9999886665555555556************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.rledlel 191
                      N  I+ea+ege+++HiiD++ s ++QWp++l+aLasR++++p+lR+T+++  + ++k++++e+ +r++kfA+ +gvpf+f++++ + ++++l++
  XP_023006995.1 221 SNGVIMEAFEGEKKLHIIDISNSFCTQWPTFLEALASRSDETPHLRLTTLVV-ARSDKKMMREISRRMEKFARLMGVPFKFKAIYYSgDISQLNF 314
                     **************************************************99.55799**************************7777******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                      eL v+ +Eala+n+v +  ++     +++++rd +++l+  l+P++++vve+ ad+  ++ +F++ + e+l+++ + fdsl+ ++p++s+e+ +
  XP_023006995.1 315 TELGVNDDEALAINCVGAFRSVT----PVDNRRDFLISLFGALRPRIITVVEEQADLdsDGVDFVKDVQECLRWFRVYFDSLDGSFPSTSDEKLM 405
                     *****************998886....888889*********************999434559******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee....sgslvlgWkdrpLvsvSaWr 374
                     +Er+  gr+iv+++a + ae +er+et+++W +rl+e GFkpv++se++++++++llrk+k dg++v ++    ++ ++l Wk++++v++ aW+
  XP_023006995.1 406 LERA-AGRAIVDLLARAPAECVERRETAARWARRLHEGGFKPVSFSEDVNDDVRALLRKYK-DGWTVLDDgegaDAGIFLAWKGQAVVWAAAWT 497
                     ****.********************************************************.99999977666688899**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MPFQIKPTKF PLFSPVLQVF LLMDTLFRLV SNLQPSDQSY NSSTSSKNSV DLQNHCFLNP  60
PPPEQCFTSS FMVDQPHFSA SSSSNHRPDK DHVHQDHEYI STINSTDRWF APLDVNLEFS  120
NGWASTLIVQ TAIAIVDNNA SQIQQLMWML NELGSPYGDI DQKLAFYFLR AMFSHVTNSG  180
ERCYQTLAMV SEKRSCFASM RRMVLKFQEV SPWMTFGHVA SNGVIMEAFE GEKKLHIIDI  240
SNSFCTQWPT FLEALASRSD ETPHLRLTTL VVARSDKKMM REISRRMEKF ARLMGVPFKF  300
KAIYYSGDIS QLNFTELGVN DDEALAINCV GAFRSVTPVD NRRDFLISLF GALRPRIITV  360
VEEQADLDSD GVDFVKDVQE CLRWFRVYFD SLDGSFPSTS DEKLMLERAA GRAIVDLLAR  420
APAECVERRE TAARWARRLH EGGFKPVSFS EDVNDDVRAL LRKYKDGWTV LDDGEGADAG  480
IFLAWKGQAV VWAAAWTPEP LDGEKSRQSS CSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-147GRAS family protein