PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006798.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 519aa    MW: 57696.6 Da    PI: 6.5099
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.16.3e-1031475181374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPil 91 
                     l +lL++cAeav+ +d + a+ lL++l+ +a   g+++qR+a++f+++La rla  ++  y  +     ++++++++ +++  al+l +e+ P +
  XP_023006798.1 147 LLHLLVACAEAVACRDRSHASILLSELRANALVLGSSFQRVASCFVQGLADRLALVQPLGYVGFglpmMSRADHSSERKKKDEALNLIYEIYPHI 241
                     579***************************************************977766665531113333344445556667777******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                     +f+h++a + Ile +ege+ vH++D+++     +G QW +L+++La+ p+    lR+Tg+g     s ++++ +ge+L++ Aee+gv++e  + v
  XP_023006798.1 242 QFGHFVAKSSILEVFEGENSVHVLDLGMAfglpYGHQWRSLIESLAECPNR-QLLRVTGIGL----SVNRYRLMGEKLKSHAEEFGVQVEVLA-V 330
                     *************************87762222678***********9876.89********....9************************99.7 PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     + +le+l++++++++ gEal++ +++q+h +++es        +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+
  XP_023006798.1 331 EGNLENLRPQDIKLHDGEALVITSIFQMHGVVKESRGALT---SVLRMIYDLSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 422
                     99*****************************977665555...8*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  +++qak  + k+k s+ y+v ee+g+lvlgWk++p+v++S
  XP_023006798.1 423 YDTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPIK--VMAQAKQWIGKFKaSESYTVVEEKGCLVLGWKSKPIVAAS 515
                     ***************************************************95..899**********9999*********************** PP

            GRAS 372 aWr 374
                     +W+
  XP_023006798.1 516 CWK 518
                     **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    
MASDADGGSF LSTDFRKEAE EGVDHSGTAH ELCLPHRRHC LSLMDDTAAS RWVISFSDEF  60
RHHKKFKLEP DSIAIDDGGA SSTNGSTSLS LSRSSSSDSL STGFRAHIWT YNQRYVAAEA  120
VEEAAAAIIN AEESAAEEDA SADGMRLLHL LVACAEAVAC RDRSHASILL SELRANALVL  180
GSSFQRVASC FVQGLADRLA LVQPLGYVGF GLPMMSRADH SSERKKKDEA LNLIYEIYPH  240
IQFGHFVAKS SILEVFEGEN SVHVLDLGMA FGLPYGHQWR SLIESLAECP NRQLLRVTGI  300
GLSVNRYRLM GEKLKSHAEE FGVQVEVLAV EGNLENLRPQ DIKLHDGEAL VITSIFQMHG  360
VVKESRGALT SVLRMIYDLS PKALVLVEQD SNHNGPFFLG RFMEALHYYS AIFDSLDAML  420
PKYDTRRAKI EQFYFAEEIK NIVSCEGMAR VERHERVDQW RRRMSRAGFQ AAPIKVMAQA  480
KQWIGKFKAS ESYTVVEEKG CLVLGWKSKP IVAASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-72GRAS family protein