PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006592.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 394aa MW: 43273 Da PI: 6.7155

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.7e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kk++ ++++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_023006592.1 11 VPPGFRFHPTEEELLHYYLRKKLSFHTVDL-DVIPDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69*************************9.99**********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + + +g++ktLvfykgrap+g+k+dW+mheyrl XP_023006592.1 105 YT-NCHRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .8889***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MSISVNGHSQ VPPGFRFHPT EEELLHYYLR KKLSFHTVDL DVIPDVDLNK LEPWDIQEKC 60 KIGTTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTNCHR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD EISTTQSSNI KASSSSVIGD GGQEEGWVVC RIFKKKNHHK 180 TLDSPVSTTI TESPSSLLLN SCNDGALEQI FHYMGQTCKD IEDGDGDGDG GGGGRLLSPI 240 DTSSGGSYLD GRFSKLPNLE SPNSTSTHNC HQPINNHVGP TDPILIPGYQ LESSSAAAAA 300 SAPHNWAAFD RLVASQLNGQ IEVSNMIYYS DQLPTPPTLR GTTSFSSKSS SSSYTAAAGQ 360 DYNNVDTELW SFAKLSSSLS SSSDPLCHVS NTPI

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MSISVNGHSQ VPPGFRFHPT EEELLHYYLR KKLSFHTVDL DVIPDVDLNK LEPWDIQEKC  60
KIGTTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTNCHR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD EISTTQSSNI KASSSSVIGD GGQEEGWVVC RIFKKKNHHK  180
TLDSPVSTTI TESPSSLLLN SCNDGALEQI FHYMGQTCKD IEDGDGDGDG GGGGRLLSPI  240
DTSSGGSYLD GRFSKLPNLE SPNSTSTHNC HQPINNHVGP TDPILIPGYQ LESSSAAAAA  300
SAPHNWAAFD RLVASQLNGQ IEVSNMIYYS DQLPTPPTLR GTTSFSSKSS SSSYTAAAGQ  360
DYNNVDTELW SFAKLSSSLS SSSDPLCHVS NTPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-114	NAC family protein