PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006521.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 723aa    MW: 78075.9 Da    PI: 6.2596
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS321.71.5e-983747223374
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++L++++e +++g+  laq +Larl+++ +sp g+p+qR+a+yf+eAL++ l++         +ps+ s+ + + ++aa+k fsevsP+l+f+++
  XP_023006521.1 374 DQLFKAVELIETGNSVLAQGILARLNHQlSSPIGKPFQRAAFYFKEALQSLLQN-------PSNPSNPSPLSIIFKIAAYKSFSEVSPVLQFANF 461
                     79************************998************************9.......44555555566*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.e 190
                     t Nqa+lea++g+ r+HiiDfdi++G+QW++L+q+La R  gpp l+iT+++s ++++  el  t+e+L++fA+ l++ fe +++  ++l++   
  XP_023006521.1 462 TSNQALLEAFNGSGRIHIIDFDIGYGGQWASLMQELALR--GPPFLKITAFASTSTHDDFELGFTQENLKNFANDLNIGFELEIINIESLNSGsW 554
                     **************************************9..9*************99***************************97777766524 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     + +L+v+++Ea+aVnl +   +l+            +L+++k+l+Pk+vv v++ +++ +++F +r+++ l+ ysal++s+ea    + +++ k+
  XP_023006521.1 555 PLALNVSENEAIAVNLPVGSLSLP-----------MILRFIKHLNPKIVVSVDRGCSRVDAPFPHRVIHGLHSYSALLESMEAV-TVNMDAQLKI 637
                     67889999**********887776...........59********************************************776.46789***** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er l+++ i++vv+ ++ +    +e+l   ++++ ++GF+p+++s+++++qa++ll++++++g+++++++ slvl+W++++Lvs+SaWr
  XP_023006521.1 638 ERYLVQPCIEKVVTSSQCS----NERLLPLKSMFLSSGFSPLTFSNFTESQAECLLQRTPVQGFHIDKSHSSLVLCWHRKELVSISAWR 722
                     ***************9998....88888999*********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    
MKAMPFPYPF DDLRPNGVLN FSSVSDSSPP TLRRHNHRQH WSSTDNTNLL KQICYVGAAE  60
PTSVLDTRRS PSPPTSTSTL SSSLGGGGGG SGGGGTASTD TTVAAPQSSL PGNPSPLDKC  120
GGGGGGGLGM DDWESVLPES PGQGPSILGL IMGDVEDPSL GLNKLLQSGG GGGGIGGGGG  180
DSHLDLEFSG SFSGVDHGLV FEPNTLAGES IVDPSLQAPS YARLSAAVSN SNAMFSGVFQ  240
NQNQLSETVD EKPQILNSPQ VMMNQNQTQF THNPPLFMPL PFASPGQDHH HFLGGVPRTK  300
RFNSGPIPPN YPVKSPFLDS GQENINRRQQ QQQQTQQVQL FPHQQQRPSM AALAKQKMVN  360
EDIVNQQLQQ GISDQLFKAV ELIETGNSVL AQGILARLNH QLSSPIGKPF QRAAFYFKEA  420
LQSLLQNPSN PSNPSPLSII FKIAAYKSFS EVSPVLQFAN FTSNQALLEA FNGSGRIHII  480
DFDIGYGGQW ASLMQELALR GPPFLKITAF ASTSTHDDFE LGFTQENLKN FANDLNIGFE  540
LEIINIESLN SGSWPLALNV SENEAIAVNL PVGSLSLPMI LRFIKHLNPK IVVSVDRGCS  600
RVDAPFPHRV IHGLHSYSAL LESMEAVTVN MDAQLKIERY LVQPCIEKVV TSSQCSNERL  660
LPLKSMFLSS GFSPLTFSNF TESQAECLLQ RTPVQGFHID KSHSSLVLCW HRKELVSISA  720
WRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-144GRAS family protein