PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006280.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 472aa MW: 53000 Da PI: 7.455

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.9e-15	22	66	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT++Ed++l + ++q+G+++W+ Ia+++ +t qc+ rw++yl XP_023006280.1 22 SWTQQEDDILREQINQHGTENWAIIASKFK-DKTTRQCRRRWYTYL 66 6**************************9.***********97 PP
2	Myb_DNA-binding	45.2	2.2e-14	72	115	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_023006280.1 72 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 115 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MQDTKKKLAT EDCKKKERHI VSWTQQEDDI LREQINQHGT ENWAIIASKF KDKTTRQCRR 60 RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR 120 AKYEALAKEN SSSFINHNNK RVLFQKGSND VSSETSQSGK RIRRAHISHT TESCSLDDGL 180 KKPCSARDQQ LRAPFAALVE NVPSIDNLPG ELPMNNAEGL KTTQGNKNQE TFIKKDDPKV 240 TALTQQAELL SSLALKVNSE NTDQSLENAW KILQNFLSRT KGNDIPRYVT PDIDLQVEDT 300 KGSVEDLRSS NDGSQWRESN LHESPGSSEY STGSTLVSQT AEEKIDQSQP EIGTHHQEPK 360 FESGSTCTGE QNNGESEKEI LPKTNLEREA FKCCNERKID TIASSFSSSE FSSPMHVIPL 420 FRSLAAGIPS PQFSESERSF LLKTLGVESP SLNPSVNPSQ PPPCKRALLQ SL

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MQDTKKKLAT EDCKKKERHI VSWTQQEDDI LREQINQHGT ENWAIIASKF KDKTTRQCRR  60
RWYTYLNSDF KKGGWSPEED LLLCEAQKIF GNRWTEIAKV VSGRTDNAVK NRFTTLCKKR  120
AKYEALAKEN SSSFINHNNK RVLFQKGSND VSSETSQSGK RIRRAHISHT TESCSLDDGL  180
KKPCSARDQQ LRAPFAALVE NVPSIDNLPG ELPMNNAEGL KTTQGNKNQE TFIKKDDPKV  240
TALTQQAELL SSLALKVNSE NTDQSLENAW KILQNFLSRT KGNDIPRYVT PDIDLQVEDT  300
KGSVEDLRSS NDGSQWRESN LHESPGSSEY STGSTLVSQT AEEKIDQSQP EIGTHHQEPK  360
FESGSTCTGE QNNGESEKEI LPKTNLEREA FKCCNERKID TIASSFSSSE FSSPMHVIPL  420
FRSLAAGIPS PQFSESERSF LLKTLGVESP SLNPSVNPSQ PPPCKRALLQ SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-167	MYB family protein