PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005857.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 450aa MW: 51248.6 Da PI: 8.5381

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.7	7.3e-29	71	156	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+++r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+k+g+ +r ++ +++++f+qlea XP_023005857.1 71 RWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMaEEHNYQRSGKKCREKFENLYKYYKKTKDGKAGR--QDGKNYRFFRQLEA 156 8***********************************889*************************97..66678*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MDDQYSLSDL RHLITAPPRS HFLSSSIPHH DLASTAFRHH HTPYDLIRSQ PTTVLGSTSP 60 TSFDAQTTTA RWPRQETLTL LDVRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK 120 CREKFENLYK YYKKTKDGKA GRQDGKNYRF FRQLEALYGE TSNATSLPDS HFVGDGNLIF 180 QPDGTNNPTS GHMSYDAQLK HYCDSLSLSN TSEFETSASS DGNDEFGSVN DSVEKRRKRR 240 AGKCWKVKIK QFIDSQMRKL IDKQEAGLEK LMKTLEQKEK ERMVWEEEWR KQEVSRIESE 300 RSFWAKERAW IEARDAALME ALQKLTGKEL ITAEPHPNED GSEILNNYQT KTIDQNNKKR 360 KDNSRSPTTT YNLYFQTDSS VYGGGGRGRG RGRGTEMKEQ SPNSSNAGGS GSGSQVVQDS 420 CFFLMGEGDQ SQSGLWENFG LKLNNGSHQT

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MDDQYSLSDL RHLITAPPRS HFLSSSIPHH DLASTAFRHH HTPYDLIRSQ PTTVLGSTSP  60
TSFDAQTTTA RWPRQETLTL LDVRSRLDSK FKEANQKGPL WDEVSRIMAE EHNYQRSGKK  120
CREKFENLYK YYKKTKDGKA GRQDGKNYRF FRQLEALYGE TSNATSLPDS HFVGDGNLIF  180
QPDGTNNPTS GHMSYDAQLK HYCDSLSLSN TSEFETSASS DGNDEFGSVN DSVEKRRKRR  240
AGKCWKVKIK QFIDSQMRKL IDKQEAGLEK LMKTLEQKEK ERMVWEEEWR KQEVSRIESE  300
RSFWAKERAW IEARDAALME ALQKLTGKEL ITAEPHPNED GSEILNNYQT KTIDQNNKKR  360
KDNSRSPTTT YNLYFQTDSS VYGGGGRGRG RGRGTEMKEQ SPNSSNAGGS GSGSQVVQDS  420
CFFLMGEGDQ SQSGLWENFG LKLNNGSHQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	263	KRRKRRAGKCWKVKIKQFIDSQMRKLIDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-95	Trihelix family protein